Gather

01/29/2012 - 12:34

 I wish someone had told me in high school that I didn't have to get up at 6 AM every morning to fuss with my hair in order to get a sleek smooth look. Turns out that the natural oil most American women shampoo out of their hair every day has a function. In its proper place, it keeps hair healthy and shiny. The fact that nearly every shampoo and conditioner in the drugstore is for "dry hair" seems to point to that being an issue for many women. Instead of using the oils naturally produced by our scalp, we wash all that off and then add something similar (but inferior) by "conditioning" our hair.

So "minimalist" hair care comes in. I certainly didn't start doing it because it's more "natural," I started getting interested in it when I started coloring my hair. Coloring your hair makes it more vulnerable to dryness. Also, depending on your color, every time you wash it's likely going to dull it a little. Other reasons that motivate people to chose more minimalist hair care are simplicity, getting a smoother texture, and preserving expensive chemical treatments (perms/straightening/relaxing).

So what is minimalist hair care? It basically posits that the oil in your hair is only an enemy in certain contexts. There is some evidence that constantly washing it out makes your scalpal sebaceous glands overactive, so when you first ditch the shampoo you might find yourself with ugly oily hair until your body figures out that you aren't going to constantly dry it out with shampoo and it doesn't need to overproduce. That was my problem at first, which was particularly bad since I have somewhat long hair.

Luckily there are two things you can do until your scalp adjusts: disperse and spot-reduce. I have a very supportive hair dresser who told me that many celebrities like Julianne Moore don't use shampoo. I don't know if that is actually true, but he told me that using a natural fiber hair brush helps distribute oil properly through the hair, bringing it from the scalp, where it can look dirty, to the ends of the hair, which are more prone to dryness-related damage.

Spot-reducing means getting rid of oil where it looks bad instead of washing your whole head. My hairdresser recommends vinegar rinses, but I prefer dry shampoo. I also do the Aveda red staining conditioner every week (luckily it doesn't have much actual conditioner so it doesn't make my hair oily), which extends the time I can go between colorings (I do Herbatint every 3 months with some staining/henna in between to minimize my exposure to some of the more questionable things that even Herbatint contains). After awhile you shouldn't have to do much spot-reducing. When done properly, no one should know that you are doing minimalist hair care. 

12/27/2011 - 22:50

 This year I did a vegan(and later semi-vegan) paleo self-experiment that I never wrote up. I guess I never wrote it up because it wasn't terribly successful and I didn't finish the run I wanted to try. I wanted to go for a month on this diet, but I only made it a week on totally vegan and two more weeks on a modified version. 

Why did I do this to myself? Is curiousity a good enough reason? After all, a similar diet is eaten by most of the Melanesian foragers popular in the paleo community. I also had a fantastic amount of access to amazing and cheap sources of starch in NYC. There are other reasons, but I feel they would weigh this post down with too many details about my personal life at the time.

The original diet was based on fruit, roots, nuts, coconut, tubers, and other assorted vegetables. At the local market I could get ten green plantains for a dollar. I could get a massive true yam as big as my head for about two dollars.

From the outset I was limited by my own food sensitivities, which limit vegetables, particularly brassica vegetables. These contain large amounts of galactans and raffinose, so-called FODMAPs that wreck me, but for vegans they are one of the best sources of calcium. I also seem to be sensitive to something in nuts, so I tried to limit them.

So my diet was mainly:

  • Coconut milk, cream, and oil
  • Cocoyam, cassava, plantains, taro, true yam, and Okinawan sweet potatoes
  • Fruits
  • Vegetables like carrots and spinach
  • A limited amount of nuts

A typical meal was chopped starch boiled in coconut milk with some vegetables and a serving of fruit on the side. I focused on fruits and vegetables high in Vitamin A because I knew I would need more since I am a poor convertor of beta-carotene to retinol.

Where is the protein? I thought perhaps I wouldn't need much if I were only eating this way short term, but after a couple of days I felt a little off and I figured it would make a difference. I added skinless urad dal, the rare legume that doesn't upset my stomach. I stopped buying cocoyam because it was mediocre and taro because it was too hard to cook. The major issue I seemed to suffer from was just not feeling very energetic, so I gave up on the vegan angle and added in shellfish and then regular fish. 

Oh great, another taro-ble meal

The shrimp-spinach-coconut milk curry from Primal Blueprint Quick and Easy Meals became a staple. But even while eating fairly energy-dense dishes like this, I still was usually getting fewer calories a day than I was used to. When I read about the two low-reward food self-experiments at Whole Health Source, in hindsight I realize that I was on a pretty low-reward diet. Lots of plain bland boring starches. Even when I tried to make them more exciting with spices I seemed to make it worse since most spices tend to dampen my appetite. I started making smoothies towards the end because it was just so hard for me to eat enough starch. And I knew that if I didn't get enough calories I would feel tired and irritable. 

Don't get me wrong, I love plantains. I love them fried in bacon fat. But boiled in coconut milk I got sick of them pretty quickly. If there is one lesson I learned from this is that you can make some pretty cheap and delicious meals out of starch cooked in leftover animal fat. And really, did it make sense for me to stuff myself in imported coconut products and shrimp when I had local meat? This plus issues with low energy led me to end the experiment about a week early. I had similar, but worse, problems on a raw vegan diet.

Perhaps this diet would be a good one for someone who wants to save a lot of money or lose weight? I also think it could be hacked by fermenting some of the starches, which would increase their caloric value and some fermented starches (like fufu) are quite tasty. A low-meat diet based on traditional African recipes that involve starches with animal broths and fermented fish sauces would also be a lot more delicious. I also didn't try supplementing the diet with DHA, taurine, and carnitine - nutrient candidates that might be the missing piece in understanding why some do not do particularly well on plant-based diets.

Self Experiment Results

Losers:

  • Me (I lost five pounds that I didn't really want to lose since I'm quite happy with my weight.)
  • Coconut
  • Cocoyam
  • Willpower

Winners:

  • Bacon
  • Plantains cooked in bacon
  • My bank account (it's pretty sad that imported coconut milk from Thailand is cheaper than local meat in NYC)
12/15/2011 - 17:06

It's bad enough that I'm dead

It's unfortunate that well-meaning health bloggers and personalities have joined grave robbers around the world in misusing mummies, particularly since there aren't a lot of them. It's clear they had some pretty tough lives and in death they are being paraded around to debunk various popular diets. If you think high-protein diets are bad, you have a tiny selection of Siberian, Aleut, and Eskimo mummies to defame. If you think grains are evil, you have a nice selection of Egyptian mummies with a few bog and ice mummies from various agrarian settlements thrown in. 

But if these diets are all so horrible, why do mummies from diverse places all seem to have atherosclerosis? And the other problems commonly represented in mummies, osteoporosis and cavities, don't seem to track with particular diets at all. For example, caries are present in Aleut mummies AND copper-age grain-eaters like Otzi. Osteoporosis is present in some Eskimo mummies, but also low-fat grain-eaters from South America. With sample sizes so low and the same problems present in all kinds of populations, I'd think nutrition geeks would be happy to leave mummies alone.

But tragically, mummy abuse is rampant in the nutritional community. I recently saw a anti-paleo vegan Youtube Series that used the poor Eskimo mummies to say "What we see here are effectively long-term studies of an animal-based Wise Traditions diet and the results are not pretty." (Credit to Cordain for first abusing these particular mummies). 

Yikes, that's one sad little study, but it's not just vegans who mistreat our poor mummy friends. Dr. Eades has written quite a bit on Egyptian mummies. While  I agree it's quite hilarious that their low-fat diet didn't do much for them, I'm not sure there are a reason to throw out the kamut just yet. 

You see, while mummies are great for understanding how people lived in the past, they aren't great tools for shooting down diets. There aren't very many of them and their health problems weren't all caused by their diets anyway. An excellent book if you are interested in mummies is Mummies, Disease, and Ancient Cultures, which includes an excellent survey of various mummies and what modern science can tell us about their health problems. Like the original scientists who studied the Eskimo mummies, this text concludes that their methods of heating and cooking were extremely detrimental to their health: "The winter houses were semisubterranean with a tunnel entrance and heated by small seal oil lamps. The hot air in the house would not sink into the tunnel when the door, in the floor of the house, was opened. This effect also trapped smoke in the house. In addition it was the duty of the women to trim the lamp at night; sleeping next to the lamp increased the exposure to smoke, resulting in severe anthracosis* at an early age and lung damage, including bronchiectasis and emphysema."

So their cooking and heating practices were the equivalent of working in a coal mine and definitely worse than smoking modern cigarettes (which almost always have a  filter). Needless to say, this is not good for your lungs, heart, or bones. Indoor air pollution from cooking and heating fires remains a major health problem in developing countries. If anything, these mummies are an excellent reason to me to be thankful for my gas stove and radiator heating during this cold December. And a reminder that things like lung and heart problems are not diseases of civilization. 

For the other mummies, in the age of modern dentistry and antibiotics, it's easy to underestimate the contribution of dental disease and infection to atherosclerosis. It's also easy to overestimate the certainty of paleopathology, which can be quite controversial:

The development of vascular calcification is related not only to atherosclerosis.4​ Other conditions may lead to the formation of such lesions, including aging, diabetes, disorders of calcium-phosphorus metabolism, chronic microinflammation, hyperhomocysteinemia, and chronic renal insufficiency.3 Moreover, given the poor state of preservation of the organic tissues, a differential diagnosis for the findings should include parasitic calcifications in lymphatic vessels (particularly from filariasis).
 

Conclusion on Mummies:

Relevance to your health: low

Chance of being haunted by vengeful undead: high

*= AKA "black lung" 

08/26/2011 - 10:32

 It seems that celiac disease is on the rise and is becoming a major public health issues. I remember when I was a kid at summer camp we all ate at the same table. By the time I was a camp counselor there was a special "peanut-free table" and admission to it was enforced through inspection. I am imagine at my children's camps there will probably be a new gluten-free table. 

But celiac incidence has risen and fallen in several cases, most notably in Sweden. In the 1980s, the incidence rate among children under two increased fourfold, then suddenly declined around 1995. Epidemiologists looked for what else had changed during this time and came up with two major factors

breastfeeding, the other was use of gluten-containing infant cereals. Further study into the matter produced a rather strong body of evidence that breast-feeding protects against celiac disease. A possible mechanism is the gut flora. I have written before about the unique properties of prebiotics in human breast milk and their role in establishment of gut flora. C-sections also interrupt establishment of gut flora, and not surprisingly they have also been connected to celiac.

One of my favorite quotes is by Joan Gussow: "I trust cows more than chemists."

I also trust millions of years of human evolution more than chemists. Breast milk is the perfect and most appropriate food for human infants. I become quite disappointed in continous misdirection in citing rare cases in which breast-feeding is literally impossible, such as adoption or after breast-cancer. In countries where breast-feeding is considered the default and formula is considered a last resort, such as Norway, breast-feeding rates are very high (around 99% of women breast feed in the first week) and many out of the remaining 20% receive donor milk. As long as formula is considered a good alternative, governments, employers, and hospitals will have an excuse not to provide support. 

07/30/2011 - 09:10

 Sometimes it seems like NYC government isn't sure what to do about food. There is a push towards a more paternalistic food policy, but it's rather laughable. For example, the "food desert" issue. Some time ago, food policy researchers started talking about "food deserts", places where it's almost impossible to get fresh fruits and vegetables without traveling a great distance. Some places in NYC were pegged as food deserts and the city had a few insipid initiatives to "help" the situation. One of them was fresh fruit and vegetable carts, called "green carts." They subsidized these carts, hoping to encourage them in these "food deserts." The problem was that savvy folks were more than happy to take the subsidy and set up in a gentrified area on the edge of a "food desert," such as Morningside Heights near Columbia University. They set up near upscale grocery stores, who were unhappy that the city was subsidizing their competition. In the meantime, I wonder how well those food policy experts who study food deserts looked into the grey market here. Get off a subway in East New York and you'll usually find several hawkers of fresh mango and other fruit. The problem is that these carts are illegal for some reason. So at the same time the city has been subsidizing Green Carts in areas where they weren't needed, they have been cracking down on some of these sidewalk vendors. The crackdown has unfortunately also happened in my neighborhood, which is economically mixed. The government says the produce might be unsafe because of car exhaust from the roads. I wonder if the government has ever heard of pesticides? The government has also been cracking down on people gathering wild berries, greens, and mushrooms from parks, a hobby of both immigrants and locavores. 

Either way, I think in urban areas like NYC, the idea that people are suffering from diabetes because they don't have fruit is delusional. Harlem is a diabetes hotspot and there is PLENTY of healthy fresh food in most of the same areas where diabetes, obesity, and heart disease is rampant. Every other store seems to have sidewalk displays of ample fresh produce, some very exotic

Display of fruits and vegetables in Hamilton Heights in Harlem, the restaurant next door is Dunkin Doughnuts

The problem here isn't lack of produce, the problem is that every other store that doesn't have produce seems to be a fried chicken joint or Dunkin doughnuts. People are so focused on the myth that produce is a magic bullet that they forget that plenty of unhealthy people eat fruits and vegetables. What's more important in making someone healthy? The inclusion of fresh produce or the exclusion of vegetable oil and sugar? Remember how much better the latter two taste anyway. In areas of the city with less of an immigrant population, efforts to get bodegas to sell fruits and vegetables have led to many bodegas having displays of rotting bananas and apples. If your store sells slurpies and apples, which one are the children going to pick? There is also the issue that in many immigrant communities vegetables might actually be a source of unhealthy eating, as they are frequently fried in the same way as in places like China, where produce consumption is connected with obesity. I find that in many immigrant communities there isn't much awareness about the health effects of using things like vegetable "ghee" or hydrogenated lard. Indeed, now that researchers are finally studying such immigrant communities, they are finding that access to produce doesn't have a connection with obesity. There have been some efforts in certain cities to limit the number of fast food restaurants, usually targeting chains, but a lot of restaurants serving fried sugary food are not chains, they are little mom and pops like the arepa stand in my neighborhood, where the well-meaning woman blissfully coats all her arepas with the cheapest margarine available. I have to wonder if she really knows that margarine isn't a good choice? The government certainly isn't about to tell her. 

06/23/2011 - 07:49

 Coconuts of French Polynesia is a fascinating blog I found though the coconut Google group. Unfortunately, it's in French, so I read in in Google Translate. Since most of us eat coconut products imported and processed far away, we don't really think about what kind of coconut those foods came from. Apparently many traditional cultures use many types of coconuts. There are oil coconuts, water coconuts, medicinal coconuts, and fiber coconuts for example. I asked the author what these rare red coconuts taste like and he said they are very tasty and sweet, with a pink color inside. 

Personally the only difference I have tasted in commercial coconut waters is between coconut water from Brazil and Thailand. The latter tastes so much better to me, particularly the Taste Nirvana brand. Perhaps someday we will be able to chose from coconut water from different places and different types of coconut. 

06/21/2011 - 20:46

 "Those shoes have no arch support!"

Yes, the tired refrain of someone wearing tank-like shoes with tons of sculpting for "support" when they see Vibrams or other totally flat thin-soled shoes. 

You'd think that from three years of such "unsupportive" shoes that my arches would have damn near collapsed. But quite the opposite has happened: they are taller and stronger than ever. In fact they are so well-developed that my shoe size has decreased quite dramatically. In high school I was a size 7. Last year I was buying size 6, but I thought maybe the brands I was buying were unusual. Much to my dismay, this year I'm more a 5.5 and now I know it's not some sort of weird sizing issue. My feet are not wider though, maybe they would be if I did more unshod barefoot running. 

It's very hard to find women's sandals that are totally flat and with a thin shoe. They either seem to be flat, but with an "Earth mama" "supportive" thick heel like these things...

Or they are cute and feminine, but have a cheap standard sole with a small heel:

On a fluke last year I found some great gladiator sandals at Payless, but they literally fell apart recently and the new items at Payless all have hideous heels. So I splurged and got the Flex Collection by Cole Haan Women's Air Vernonia Gladiator Sandal  

It has a nice thin flexible Nike Free sole. Unfortunately the straps are quite uncomfortable and I'm still breaking them in a week later. I'll review them eventually, but if you know of a totally flat AND feminine sandal with a flexible sole, post it in the comments. 

 

06/09/2011 - 12:58

I was home for a little while last week and noticed all my family members had So Delicious Coconut Milk in their fridges. I admit that I was excited when this product came out because it acts a lot like real milk. It doesn't form an oily film when you put it in coffee, for example. However, unless you really need it for that, I kind of think it's a scam and not really a "real food." Also, I don't know how their food scientists modify the fat to make it act like that, it's possible that like milk homogenization, this process affects the digestibility of the final product. 

First of all, the ingredients: 

INGREDIENTS: Coconut Cream (Water, Coconut, Guar Gum), Organic Evaporated Cane Juice, Calcium Phosphate, Magnesium Phosphate, Carrageenan, Vitamin A Palmitate, Vitamin D-2, L-Selenomethionine (Selenium), Zinc Oxide, Folic Acid, Vitamin B-12.

So it's fortified and fortified foods are questionable in my book. Vitamins you get from fortification are not the same as those in whole foods and studies have shown some questionable results. Googling any of those nutrients + fortification is illuminating. Folic acid, for example, has been tied to cancer. Some of them are harder to figure out. For example, I know that Vitain A Palmitate is a form of retinol, but not everyone knows that. Retinol supplementation has been tied to birth defects. Sorry, I prefer to get my nutrients from food, not from products

Then we have the additives. I don't like to consume foods with additives in general, though some are harmless. There are a few here that might cause GI distress and other negative effects in some people. Carrageenan, for example, was discussed on paleohacks as a potential cause of GI ulcers and cancer. Chris Kresser recently discussed why guar gum might cause stomach aches in his great article on "why coconut milk may not be your friend."

Then there is the value. 1 cup So Delicious coconut milk has only 45 calories. The coconut milk I buy has 440 calories in a cup. If I need something with less calories I can dilute it. In fact I often buy coconut cream, which has twice the calories, and dilute it into milk since a can is the same price! Either way, for extremely thinned-out coconut milk, So Delicious is rather expensive. 

Overall, I'd say this is an industrial product and not a real food. Avoid. 

 

05/20/2011 - 14:55

 Another hypothesis is that lack of SCFAs is behind such diseases of civilization. A SCFA called butyrate provides some insight into this. Butyrate is the preferred fuel of the colonic epithelial cells and also plays a major role in the regulation of cell proliferation and differentiation (Wong, de Souza, Kendall, Emam, & D. J. a Jenkins, 2006). Lower than normal levels have been found in patients with several diseases, notably types of colitis and inflammatory bowel disorder. Studies show such diseases can be treated through application of butyrate in the colon. That and the fact that some studies show complete remission through bacteriotherapy transplants point to these diseases being caused by disturbed populations of gut bacteria. Interestingly, these diseases are common in captive populations of apes and unheard of in wild apes (McKenna et al., 2008).

Bacteria affect butyrate production, but so do dietary inputs. Certain fibers produce more butyrate than others in humans, whether or not this differs between primates would be an interesting avenue of research (Smith, Yokoyama, & German, 1998).

Figure 1: Butyrate production in response to fiber

Interestingly, one of the top producers is something known as “resistant starch.” Resistant starch represents the growing nuance in understanding of fiber, since it is a starch that acts like a fiber in terms of acting as a bacterial substrate. It first showed up on the scientific radar when scientists found that low rates of colon cancer were not just found in populations with high-fiber diets, but those with high-starch diets (O'Keefe, Kidd, Espitalier-Noel, & Owira, 1999)1. Researchers found that a particular starch resisted digestion and ended up being fermented by colonic flora. They called this resistant starch and it is found mostly in cooked starches, some raw starches like green bananas, and some rough unprocessed grains and seeds. The former is termed type III and is a major part of the diets of many foraging populations who consume pounded and cooked starches like cassava, taro, true yam, and sago palm.

Whether or not humans are better adapted to certain types of resistant starch remains unexplored, but could account from some inconsistent results in studies that used type I resistant starch, mostly found in grains and seeds that would have probably been relatively uncommon in our ancestral diet. These studies have shown poor results and others with promising results are marred by high drop out rates due to unpleasant gastrointestinal side effects (Rinne et al., 2005; de Vrese & Marteau, 2007; Vuksan et al., 2007). Whether some populations would do better on this type of starch versus others would be an interesting investigation, but very few cultures consume large amounts of unmilled seeds and grains.

What type of starch we are best adapted to is interesting because the role of starch in human evolution is so controversial. Richard Wrangham has suggested that utilization of cooked starches was one of the dietary quality innovations that fed our rapidly expanding expensive brain tissue as it evolved towards hominid size (Wrangham, 2003). Recent analysis throws a wrench in that theory because it suggests habitual use of fire came after encephalization, about 300,000 years ago (Roebroeks & Villa, 2011). However, this does not mean that such cooked starches did not change humans, even if it reduces their significance in human evolution.

The burgeoning field of archeological starch grain analysis has transformed our view of hominids once thought to be mostly carnivorous. Microfossils on Neanderthal teeth from around 44,000 years ago show evidence of the consumption of many roots and tubers, some of which show evidence of cooking (Henry, Brooks, & Piperno, 2010). The full impact of the adoption of cooked starches on the human body has not been fully elucidated. One promising adaptation is the starch-digesting salivary amalyse gene, AMY 1 (Perry et al., 2007). Chimpanzees and bonobos have only two copies of this gene, humans have as many as 10 copies, though it varies quite heavily by population from 2 to 10 correlated with the importance of starch in the diet. Molecular genetic evidence places the origin of divergence on this gene at about 200,000 years, about the time when habitual fire use became common. Further genetic analysis shows that adaptations to root and tuber starch as a major source of calories may account for variation in human folic acid metabolism, since folic acid is usually low in starchy vegetables (Hancock et al., 2010).

Another relatively unexplored avenue of research would be whether butyrate in the diet itself has led to decreased reliance on butyrate for colonic fermentation in some cultures that consume large amounts of dietary butyrate. The major source of butyrate in food is from the milk fats of grazing animals (Smith et al., 1998).

It is most common in the modern diet in butter at 3%. It is possible that pastoral cultures consume substantial amounts of exogenous butyrate. Currently there have been few studies on oral consumption of butyrate in humans. Animal studies have been inconclusive, with some showing positive effects and some showing negative effects, which is complicated by the fact that if ingested orally it is also present in the small intestine, where it may play different roles (Sengupta, Muir, & Gibson, 2006; Wächtershäuser & Stein, 2000). A small study found orally-administered butyrate had a positive effect on symptoms of Crohn’s disease, but the method of administration was through pills rather than food (Di Sabatino et al., 2005).

Another potential source of butyrate is fermented foods. Some fermented foods like ogi, a pounded fermented starch, contain measurable levels (Hesseltine, 1979). Fermented foods are worth examining evolutionarily because they represent another human dietary innovation in improving food quality. Fermentation increases the bioavailability of nutrients, breaks down starches, and reduces levels of anti-nutritional factors and toxins (Mugula, 2003). It is unknown how long humans have been purposefully fermenting food. Fermentation naturally occurs in the wild and many wild animals are known to indulge in such foods to the point of drunkenness (Dudley, 2002). Spontaneous fermentation and consumption of such foods by wild primates is unfortunately not well studied. However, fermentation is practiced by almost every known culture to some extent, with the largest diversity in fermented foods among African farmers (Dirar, 1993) It is estimated that fermented foods make up 1/3 of the diet of humans worldwide (van Hylckama Vlieg, Veiga, Zhang, Derrien, & Zhao, 2011). Exogenous fermentation may substitute for the reduced fermentative ability of the human gut.
 

1. The researchers concluded that colon cancer risk was increased with meat consumption. I will remain skeptical until they do studies on other cultures that eat relatively low-fiber and high-meat diets like the Masai and Siberian cultures for example.


Di Sabatino, A., Morera, R., Ciccocioppo, R., Cazzola, P., Gotti, S., Tinozzi, F. P., et al. (2005). Oral butyrate for mildly to moderately active Crohnʼs disease. Alimentary pharmacology & therapeutics, 22(9), 789-94. doi: 10.1111/j.1365-2036.2005.02639.x.


Dirar, H. A. (1993). The indigenous fermented foods of the Sudan: a study in African food and ... (p. 552). CAB International. Retrieved May 9, 2011, from http://books.google.com/books?id=J-ogAQAAIAAJ&pgis=1.


Dudley, R. (2002). Fermenting fruit and the historical ecology of ethanol ingestion: is alcoholism in modern humans an evolutionary hangover? Addiction (Abingdon, England), 97(4), 381-8. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/11964055.


Hancock, A. M., Witonsky, D. B., Ehler, E., Alkorta-Aranburu, G., Beall, C., Gebremedhin, A., et al. (2010). In Light of Evolution IV: The Human Conditions Sackler Colloquium: Human adaptations to diet, subsistence, and ecoregion are due to subtle shifts in allele frequency. Proceedings of the National Academy of Sciences of the United States of America, 107(Supplement_2), 8924-8930. doi: 10.1073/pnas.0914625107.


Henry, A. G., Brooks, A. S., & Piperno, D. R. (2010). Microfossils in calculus demonstrate consumption of plants and cooked foods in Neanderthal diets (Shanidar III, Iraq; Spy I and II, Belgium). Proceedings of the National Academy of Sciences of the United States of America, 1-6. doi: 10.1073/pnas.1016868108.
Hesseltine, C. W. (1979). Some important fermented foods of Mid-Asia, the Middle East, and Africa. Journal of the American Oil Chemists’ Society, 56(3), 367-374. Springer Berlin / Heidelberg. doi: 10.1007/BF02671501.


Hylckama Vlieg, J. E. van, Veiga, P., Zhang, C., Derrien, M., & Zhao, L. (2011). Impact of microbial transformation of food on health-from fermented foods to fermentation in the gastro-intestinal tract. Current opinion in biotechnology, 22(2), 219-211. doi: 10.1016/j.copbio.2010.12.004.


McKenna, P., Hoffmann, C., Minkah, N., Aye, P. P., Lackner, A., Liu, Z., et al. (2008). The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. PLoS pathogens, 4(2), e20. doi: 10.1371/journal.ppat.0040020.


Mugula, J. (2003). Microbiological and fermentation characteristics of togwa, a Tanzanian fermented food. International Journal of Food Microbiology, 80(3), 187-199. doi: 10.1016/S0168-1605(02)00141-1.


OʼKeefe, S. J., Kidd, M., Espitalier-Noel, G., & Owira, P. (1999). Rarity of colon cancer in Africans is associated with low animal product consumption, not fiber. The American journal of gastroenterology, 94(5), 1373-80. doi: 10.1111/j.1572-0241.1999.01089.x.


Perry, G. H., Dominy, N. J., Claw, K. G., Lee, A. S., Fiegler, H., Redon, R., et al. (2007). Diet and the evolution of human amylase gene copy number variation. Nature genetics, 39(10), 1256-60. doi: 10.1038/ng2123.


Rinne, M. M., Gueimonde, M., Kalliomäki, M., Hoppu, U., Salminen, S. J., & Isolauri, E. (2005). Similar bifidogenic effects of prebiotic-supplemented partially hydrolyzed infant formula and breastfeeding on infant gut microbiota. FEMS immunology and medical microbiology, 43(1), 59-65. doi: 10.1016/j.femsim.2004.07.005.


Roebroeks, W., & Villa, P. (2011). On the earliest evidence for habitual use of fire in Europe. Proceedings of the National Academy of Sciences of the United States of America, 1018116108-. doi: 10.1073/pnas.1018116108.


Sengupta, S., Muir, J. G., & Gibson, P. R. (2006). Does butyrate protect from colorectal cancer? Journal of gastroenterology and hepatology, 21(1 Pt 2), 209-18. doi: 10.1111/j.1440-1746.2006.04213.x.


Smith, J., Yokoyama, W., & German, J. B. (1998). Butyric Acid from the Diet: Actions at the Level of Gene Expression. Critical Reviews in Food Science and Nutrition, 38(4), 259-297. doi: 10.1080/10408699891274200.


Vrese, M. de, & Marteau, P. R. (2007). Probiotics and Prebiotics: Effects on Diarrhea. J. Nutr., 137(3), 803S-811. Retrieved May 9, 2011, from http://jn.nutrition.org/cgi/content/abstract/137/3/803S.


Vuksan, V., Whitham, D., Sievenpiper, J. L., Jenkins, A. L., Rogovik, A. L., Bazinet, R. P., et al. (2007). Supplementation of conventional therapy with the novel grain Salba (Salvia hispanica L.) improves major and emerging cardiovascular risk factors in type 2 diabetes: results of a randomized controlled trial. Diabetes care, 30(11), 2804-10. doi: 10.2337/dc07-1144.


Wong, J. M. W., Souza, R. de, Kendall, C. W. C., Emam, A., & Jenkins, D. J. a. (2006). Colonic health: fermentation and short chain fatty acids. Journal of clinical gastroenterology, 40(3), 235-43. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/16633129.


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Wächtershäuser, a, & Stein, J. (2000). Rationale for the luminal provision of butyrate in intestinal diseases. European journal of nutrition, 39(4), 164-71. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/11079736.

 

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05/17/2011 - 20:39

 This will be one of the few series posts I'll actually finish since it's already written :) I'd like to thank Stephan Guyenet, Chris Masterjohn, and Professor Holloway for their tips, critiques, and inspiration! I welcome more such educated thoughts in the comments. Full disclosure: yes, I did write this for a class, but I thought some people might enjoy it and then I could also kill two birds with one stone. Haha. 

In 1995, anthropologists Leslie C. Aiello and Peter Wheeler published a paper on a theory they termed The Expensive Tissue Hypothesis (ETH). Expensive refers to our brain tissue, which is uniquely metabolically demanding compared to other primate brains (Aiello & Wheeler, 1995). However, our total metabolic rate is close to what would be predicted for a primate our size, so according to the ETH, humans compensated for the increased metabolic costs of the brain by evolving less metabolically expensive splanchnic organs, which include the gut and liver. Humans were able to fuel their large brains using only a relatively small gut because increased dietary quality reduced the need for gut mass. The hypothesis was that the main driver of this increased dietary quality was the increased use of animal products.

Aiello and Wheeler

This hypothesis rests on assuming that reduced gut size coincided with the major jump in encephalization experienced by hominids millions of years ago. In their calculations, Aiello and Wheeler used the modern human gut to demonstrate its uniquely small size. Unfortunately, using the modern human gut as a hallmark has some problems, as there is some evidence that it has been reduced in size due to dietary innovations that may have taken place long after encephalization and since these innovations it has possibly continued to evolve. The trend in human innovation has been towards a diet of increased quality and this innovation continues even today. In response to these dietary changes, the human population shows variation in dietary adaptations. The reorganization and variation of the human colon provides important clues about this process.

Exactly how unusual is the modern human gut? Based on a reduced major axis equation computed for higher primates, the human gut should be about 781 grams larger (Aiello & Wheeler, 1995).

It is hard to know when this change started, as guts do not fossilize nor do they leave their impressions as brains do in endocasts. However, it is possible to infer some information from post-cranial anatomy. Living apes with big guts have protuberant abdomens to accommodate them.

Skeletally, they have a rounded abdomen continuous with the lower portion of the rib cage, giving it a funnel shape, as well as a wide pelvis with flared upper margins. In the fossil record we can see that Australopithecus afarensis had skeleton anatomy that would indicate a large gut if this pattern holds.

Figure 3: Chimpanzee, human, and Australopithecus afarensis, from Aiello and Wheeler

In contrast, the human pelvis size is reduced and the abdomen has a defined waist region. Hominids start exhibiting this in the fossil record starting with Homo erectus, about 1.5 million years ago. However, there is some evidence that this anatomical change may not have to do with gut size. For one, it is not entirely a consistent pattern among hominids. Reconstructions of a post-cranial Neanderthal skeleton based on the 70,000 year old La Ferrassie 1 and 60,000 year old Kebara 2 specimens shows a wider trunk showing up again (Sawyer & Maley, 2005).

It is possible that the trunk and pelvis size represented adaptations to cold, a type of hunting, or some other lifestyle variable (Bramble & Lieberman, 2004). Until more data is collected and analyzed tying post-cranial anatomy to gut mass, it is hard to tell if the inference is valid.

In response to the ETH paper in 1995, Katherine Milton questioned whether the data presented was really representative of our species. She stated that our guts may have played a larger role before the relatively recent invention of agriculture when fiber consumption was much greater and our guts might have been larger then because of “gut plasticity.” She mentioned that what really sets us apart from our primate relatives is the reorganization of the gut morphologically rather than the size.

In humans compared to primates, the gut is reorganized. The size of the colon is much reduced and the size of the small intestine is increased. The human colon takes up 17-23% of the digestive tract. In chimpanzees, orangutans, and gorillas it occupies 52-54%. Instead of a large colon, humans have a small intestine that represents 56-67% of the gut (Milton, 1989).

from Milton

These are important to note because of their role in digesting food. The small intestine is where primate enzymes digest and absorb nutrients immediately available in food. In contrast, the colon can be thought of as a bioreactor, where bacteria digest otherwise useless dietary constituents into important nutrients and other chemical byproducts. These include short-chain fatty acids (SCFA), organic fatty acids with 1-6 carbon atoms created by the fermentation of polysaccharides, oligosaccharides, protein, peptides, and glycoprotein precursors in the colon. The major source of these in primates is through the fermentation of fiber and some types of starch. The major difference in this matter between humans and the other great apes is that apes such as the gorilla are able to use their larger colons to obtain as much as 60% of their caloric intake from SCFA alone (Popovich et al., 1997). Upper estimates for human caloric use of SCFA range from seven to nine percent. (McNeil, 1984).

Figure 6: The contribution of SCFA to metabolism in gorillas from Popovich, et al.

Aiello, L. C., & Wheeler, P. (1995). The Expensive-Tissue Hypothesis: The Brain and the Digestive System in Human and Primate Evolution. Current Anthropology, 36(2), 199. doi: 10.1086/204350.

Bramble, D. M., & Lieberman, D. E. (2004). Endurance running and the evolution of Homo. Nature, 432(7015), 345-52. Nature Publishing Group. doi: 10.1038/nature03052.

McNeil, N. (1984). The contribution of the large intestine to energy supplies in man. Am J Clin Nutr, 39(2), 338-342. Retrieved May 2, 2011, from http://www.ajcn.org/cgi/content/abstract/39/2/338.

Milton, K. (1989). Primate diets and gut morphology: implications for hominid evolution. In M. Harris & E. B. Ross (Eds.), Food and Evolution: Toward a Theory of Human Food Habits (p. 93). Temple University Press. Retrieved May 8, 2011, from http://books.google.com/books?hl=en&lr=&id=xHYxSHr86T8C&pgis=1.

Popovich, D. G., Jenkins, D. J. A., Kendall, C. W. C., Dierenfeld, E. S., Carroll, R. W., Tariq, N., et al. (1997). The Western Lowland Gorilla Diet Has Implications for the Health of Humans and Other Hominoids. J. Nutr., 127(10), 2000-2005. Retrieved April 28, 2011, from http://jn.nutrition.org/cgi/content/abstract/127/10/2000.

Sawyer, G. J., & Maley, B. (2005). Neanderthal reconstructed. Anatomical record. Part B, New anatomist, 283(1), 23-31. doi: 10.1002/ar.b.20057.
 

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